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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs180687403 chr7:47201276 T/C DRGX chr10:50572226-50604062:- 0.76 7.96 1.5E-10 Box Plot
ACC rs182201861 chr18:37101164 A/T PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs182972823 chr2:224223707 G/A PRHOXNB chr13:28552243-28562774:- 0.59 7.99 1.3E-10 Box Plot
ACC rs183037461 chr3:128553421 C/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs183047111 chr3:128550741 C/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs184228685 chr2:224181685 C/T PRHOXNB chr13:28552243-28562774:- 0.59 7.99 1.3E-10 Box Plot
ACC rs1844115 chr3:6403176 T/C OR5V1 chr6:29323007-29399744:- 0.57 7.96 1.45E-10 Box Plot
ACC rs185084144 chr8:9154202 A/AT PRHOXNB chr13:28552243-28562774:- 0.66 8.76 8.12E-12 Box Plot
ACC rs1863276 chr15:99216304 A/G PRHOXNB chr13:28552243-28562774:- -0.6 -7.68 4.1E-10 Box Plot
ACC rs186653757 chr18:37101166 T/C PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs1881793 chr2:124917657 A/G GC chr4:72607410-72669758:- 0.68 9.87 1.65E-13 Box Plot
ACC rs1895013 chr8:113235729 T/A KRT6C chr12:52862300-52867569:- 0.68 8.19 6.28E-11 Box Plot
ACC rs1909628 chr10:61352680 A/C GAGE2D chrX:49207160-49214420:+ 0.5 8.14 7.77E-11 Box Plot
ACC rs1909630 chr10:61351504 C/T GAGE2D chrX:49207160-49214420:+ 0.5 8.14 7.77E-11 Box Plot
ACC rs1909633 chr10:61350004 A/G GAGE2D chrX:49207160-49214420:+ 0.5 8.14 7.77E-11 Box Plot